you massacred 180 school girls
JUSTICE THE AMERICAN WAY. 🇺🇸🔥View quoted post on X
Dylan Abramson
@DlanAbr
phd doing protein design @ ETH D-BSSE
130 Following 77 Followers 28 Posts
Latest posts 5
First PhD paper is out 👀We built an automated pipeline to do NMR on de novo proteins at scale. We believe designed proteins can be a lens for fundamental biophysics
biorxiv.org/content/10.648…
biorxiv.org/content/10.648…
really beautiful paper
Announcing Ambient Protein Diffusion, a state-of-the-art 17M-params generative model for protein structures.
Diversity improves by 91% and designability by 26% over previous 200M SOTA model for long proteins.
The trick? Treat low pLDDT AlphaFold predictions as low-quality dataView quoted post on X
little weekend project of interacting with pyMOL with claude commands. Similar to github.com/ChatMol/ChatMo… but allows execution of arbitrary python code and has a lil staging environment.
Code: github.com/dylanabramson3…
Code: github.com/dylanabramson3…
1:01
Excited for an open source version to see the degree of "usefulness only at scale" (arxiv.org/pdf/2404.19737) involved in dropping equivariance. I would expect that equivariant structure module à la FrameFlow would be way more parameter effecient but maybe I just have math envy
Thrilled to announce AlphaFold 3 which can predict the structures and interactions of nearly all of life’s molecules with state-of-the-art accuracy including proteins, DNA and RNA. Biology is a complex dynamical system so modeling interactions is crucial blog.google/technology/ai/…View quoted post on X
