Ricardo Henriques

@HenriquesLab

@AIOpticalBioLab. Group Leader @itqbnova & H. Prof @LMCB_UCL. #Nanoscopy & #AI for #LifeSciences. #SRRF sensei. #ERCCoG, #EMBO member. Dad. Opinions my own

Lisbon and London henriqueslab.org Joined August 2009

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Ricardo Henriques @HenriquesLab Sep 15

🔬🚀 New paper out: mAIcrobe, our open-source #napari plugin for high-throughput bacterial image analysis. Segmentation, morphological profiling and cell cycle classification, all in one place 👇

doi.org/10.1038/s44488…

Screenshot of the published article page: title mAIcrobe, an open-source framework for high-throughput bacterial image analysis, the seven authors, and the abstract.

Diagram of the mAIcrobe workflow. Acquisition feeds into segmentation with StarDist, Cellpose and community models, then morphological profiling and a three-class cell cycle classifier, ending in a feature-space scatter plot with three separated clusters.

Ricardo Henriques @HenriquesLab Oct 29

🔬 Thank you @observadorpt and Sofia Teixeira! Light damages the cells we image, so today we follow an infection for minutes at most. With #VirusAwareScopes at @itqbnova, funded by Fundação "la Caixa", we want to follow it for days x.com/observadorpt/s…

Observador @observadorpt Oct 29

E se um microscópio pudesse seguir uma infeção do princípio ao fim? ebx.sh/qJpIrO
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Ricardo Henriques @HenriquesLab Oct 27

🔬📈 We mapped #bioimage analysis use in #microscopy papers. ImageJ+Fiji dominate; others are rising. Papers undercite them and lack detail to reproduce analyses.
By @T_Shakespeare & @Bruno_MSaraiva, with @inesmcunha, @caron_ajacobs & the Jacquemet lab
📄 doi.org/10.64898/2026.…

First page of the preprint Mapping bioimage-analysis software adoption in microscopy by Tayla Shakespeare, Bruno M. Saraiva, Inês Cunha, Caron Jacobs, Guillaume Jacquemet and Ricardo Henriques, showing the title, authors and abstract.

Ricardo Henriques @HenriquesLab Oct 27

Last day to apply: our two ERC-funded Master's fellowships close tonight at 23:59 Lisbon time. For 066 (smart microscopy of infection) we are looking for physicists, engineers and computer scientists.
euraxess.ec.europa.eu/jobs/472471

Ricardo Henriques @HenriquesLab Oct 22

Our two ERC-funded PhD-track fellowships close Tuesday 27 October. Physicists, engineers and computer scientists: one call is yours, building a smart microscope that catches infection live and images it at 20 nm. Start in December at ITQB NOVA. henriqueslab.org/pages/recruitm…
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Ricardo Henriques @HenriquesLab Oct 22

Our two ERC-funded PhD-track fellowships close Tuesday 27 October. Physicists, engineers and computer scientists: one call is yours, building a smart microscope that catches infection live and images it at 20 nm. Start in December at ITQB NOVA. henriqueslab.org/pages/recruitm…

henriqueslab.org Recruitment Open positions in the HenriquesLab

Ricardo Henriques @HenriquesLab Oct 14

🔬🚀 A head start on your PhD! Two ERC-funded fellowships for Master's graduates at ITQB NOVA, Lisbon: seven months in our lab (Dec 2026 to Jun 2027) to start your research and build a strong 2027 FCT PhD application with us.

Apply by 27 Oct 👇
henriqueslab.org/pages/recruitm…

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