The @ChanZuckerberg Cell Science Meeting in Chicago just concluded. I had the opportunity to present the latest advancements in spatial omics within the #scverse ecosystem, highlighting our efforts to scale our infrastructure in preparation for the datasets of tomorrow.
Luca Marconato
@LucaMarconato2
Computational scientist at EMBL in the @OliverStegle lab. Deep learning methods and infrastructures for spatial multi-omics data.
366 Following 606 Followers 88 Posts
Latest posts 5
Join us in Paris at the @OwkinScience headquarters to work together on spatial omics! #scverse
Owkin and @scverse_team are excited to announce their upcoming hackathon, focused on spatial omics data analysis.View quoted post on X
📅 March 17-19, 2025
📍 Owkin office, Paris
If you are a bioinformatician interested in spatial biology, this is your chance to make a contribution to open-source packages.
What to expect:
💡 Develop and enhance open-source packages for spatial omics analysis
🤝 Network with both Scverse and local bioinformatic communities
🔬 Work with cutting-edge spatial omics data
Deadline for applications: February 7th, 2025
Places are limited—Apply now: docs.google.com/forms/d/e/1FAI…
The latest #scverse hackathon on spatial omics has really been a blast! A small example: Day 2 was planned from 8:30 am to 6:00 pm, yet we had people hacking until 9-10 pm! (pics 2-3).
Looking forward to the new in-person event!
Looking forward to the new in-person event!
Recently, we held the first #scverse SpatialData 3-day hackathon in Basel (Switzerland), where we brought together 20 developers from the Python, R, and web communities to work on interoperability, performance, and ergonomics for spatial omics data. Here is what we worked on!View quoted post on X
I had the opportunity to present my work at BIOINFO 2024 in Gyeongju, Korea. It was great to meet previous colleagues from Heidelberg, @pjb7687 and @hyobin_jeong, and be welcomed by such a vibrant research community!
@LucaMarconato2 is giving a super nice tutorial on SpatialData @ BIOINFO2024, KSBi in Gyeongju, Korea.View quoted post on X
In September, I represented the SpatialData team at SCG 2024. I was honored to receive a best poster award; I want to thank my team (in particular @g_palla1, Tim, @WVierdag, @ky396, Sonja, ...) who made the project possible. In the pic, @gtcaa and @MKoutrouli from @scverse_team.