Introducing In-Context Module discovery (ICM): interpretable gene modules for comparing cell states across datasets. ICM is the latest advance for our virtual cell modelling framework: Parthenon.
ICM learns from primary human cells across 66 datasets and adapts its modules to new contexts without retraining.
In microglia, ICM recovers known state signatures, reveals unexpected cellular features in experimental models, and helps explain why a specific perturbation strongly shifts gene expression in one model and barely in another.
This gives biologists better tools choose perturbations and design better in vitro experiments.
ICM learns from primary human cells across 66 datasets and adapts its modules to new contexts without retraining.
In microglia, ICM recovers known state signatures, reveals unexpected cellular features in experimental models, and helps explain why a specific perturbation strongly shifts gene expression in one model and barely in another.
This gives biologists better tools choose perturbations and design better in vitro experiments.
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