This is soo cool! 🤩,
Viewing rfam.org/family/RF00080 Manganese riboswitch with its genomic context
Viewing rfam.org/family/RF00080 Manganese riboswitch with its genomic context
With multimodal search now in SeqHub, including our intergenic SAE features (patterns identified in intergenic regions), you can now explore and discover gene neighborhoods and pathways more easily.View quoted post on X
Once you identify a feature of interest, you can run example searches such as...
1. Search the ribosomal protein uS2 with feature #13341 to retrieve a conserved RNA structure that has no match in Rfam at all.
2. Search for SAE feature #6752 (metal-responsive riboswitch upstream of cation transporters), but exclude hits with the known manganese riboswitch (RF00080), to surface divergent riboswitch candidates that existing annotation models miss.
seqhub.org/search?feature…
