VastDB

@VastDB

VastDB is a repository of quantitative profiles of alternative splicing events and GE data across different tissues and species. Developed at @CRGenomica

Barcelona, Spain vastdb.crg.eu Joined July 2017

424 Following 306 Followers 173 Posts

Latest posts 5

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VastDB @VastDB Dec 23, 2021

We have released a new batch of functional annotations (v11): 600 entries from previous publications investigating the function of AS events. This makes a total of 3637 entries directly from publications, 397 from CRISPR screens and 1511 from experimentally validated ELMs.

VastDB @VastDB Jun 19, 2025

Cotyledon opening during seedling deetiolation is determined by ABA-mediated splicing regulation

embopress.org/doi/full/10.10…

VastDB @VastDB Dec 1, 2023

Amazing review on the functions of alternative splicing!

Weatheritt Lab @Neuro_RNA Nov 30, 2023

What is the function of alternative splicing in the proteome? What cellular functions does it impact? Our review (rdcu.be/dsryX)
just published in @NatureSMB suggests splicing impacts almost every cellular process. Fantastic work by @kjer_peter! A short 🧵 below
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VastDB @VastDB Jun 7, 2023

The SCL30a SR protein regulates ABA-dependent seed traits and germination under stress

onlinelibrary.wiley.com/doi/full/10.11…

VastDB @VastDB Nov 21, 2022

Soon in @VastDB ! 😎

Manuel Irimia @mirimiam Nov 16, 2022

How has tissue-specific gene expression evolved since the origin of bilaterian animals all the way to extant vertebrates and insects? To address this, we assembled a vast RNA-seq dataset covering 8 tissues and 20 species, generating 95 new RNA-seq samples for 15 species. 1/16

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