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Alexander Ecker

@alxecker

Neuroscience, Machine Learning, Computer Vision. Scientist @uniGoettingen, @mpids and co-founder of @maddox_ai | @aecker.bsky.social
Göttingen, Deutschland eckerlab.org Joined July 2017
449 Following 2.2K Followers 402 Posts

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Alexander Ecker @alxecker
It's been so much fun to be part of this journey!
After 7 years, thrilled to finally share our #MICrONS functional connectomics results!

We recorded activity from ~75K neurons in visual cortex in a single mouse, then mapped its wiring using electron microscopy. To systematically characterize neuron function, we built the first foundation model of the mouse visual cortex—trained via deep learning on data pooled from multiple mice and visual cortical areas.

Our foundation model generalized to new neurons, animals, and even unseen stimulus domains. It also accurately predicted entirely new modalities, such as anatomically defined cell types. Importantly, this robust generalization enabled us to create accurate functional digital twins of individual mouse brains.

Using the digital twin of the MICrONS mouse—where we knew the exact neuronal wiring—we discovered that neurons don’t connect randomly, even when anatomically positioned to do so. Instead, given multiple potential partners (axons near dendrites), neurons preferentially choose partners with similar feature selectivity (“what”) rather than receptive field overlap (“where”).

Foundation models offer a powerful approach to systematically decode the neural code of intelligence.

Huge thanks to @IARPAnews for funding this groundbreaking effort through the @BRAINinitiative, and to our amazing team at @Stanford @StanfordMed @bcmhouston, @Allen, @Princeton, @uniGoettingen and others!

#Neuroscience #MICrONS #NeuroAI #Connectomics #FoundationModels #AI

nature.com/immersive/d428…
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Alexander Ecker @alxecker
If you want to work with us on the interface of machine learning and neuroscience, consider applying through the ELLIS PhD Program.
ELLIS @ELLISforEurope Sep 29, 2023
The portal is open: Our #ELLISPhD Program is now accepting applications! Apply by November 15 to work with leading #AI labs across Europe and choose your advisors among 200 top #machinelearning researchers!

#JoinELLISforEurope #PhD #PhDProgram #ML ellis.eu/news/ellis-phd…
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