Tim Warwick

@tim_warwick

Bioinformatics | Chromatin | RNA | Epigenetics
Researcher
@BrandesLab, @goetheuni, @CPI_ExStra @trr267

Frankfurt on the Main, Germany vrc.uni-frankfurt.de Joined June 2013

405 Following 2.1K Followers 113 Posts

Latest posts 5

Tim Warwick @tim_warwick Oct 9, 2024

Do you want to detect #RNA-#DNA interactions from RADICL-seq, Red-C or GRID-seq, but lack a reliable method? Then try RADIAnT, our new statistical framework for calling robust, consistent interactions from RNA-DNA ligation methods biorxiv.org/content/10.110…

Tim Warwick @tim_warwick Mar 22, 2024

How do ubiquitous chromatin remodeling complexes alter accessibility of cell-type specific enhancers? We analysed genome-wide #RNA-#DNA interactions and found enrichments in RNA binding at SWI/SNF-bound enhancers (1/4)

James A. Oo @JamesAOo7 Mar 22, 2024

Happy to share our pre-print on #lncRNA recruitment of SWI/SNF to cell type-specific #enhancers.

We performed several sequencing experiments to reveal the mechanism for how the highly conserved and ubiquitously expressed SWI/SNF finds its DNA targets genome-wide.
View quoted post on X

Tim Warwick @tim_warwick Jul 26, 2023

For anybody at #ISMBECCB2023 interested in mechanisms of regulatory #RNA, I’ll be giving a talk on our recently published method on prediction of RNA-DNA interactions at 12:20 TODAY in the iRNA session! @BrandesLab @TheMarcelSchulz @trr267 @CPI_ExStra

Tim Warwick @tim_warwick Jul 25, 2023

“Questions from the floor” happening very literally in the #ISMBECCB2023 @ISCB_RegSys session, where the audience are forced to sit in the aisle due to lack of capacity…

Tim Warwick @tim_warwick Jul 24, 2023

Very excited to be in #Lyon for #ISMBECCB2023, as part of a great group of people representing @goetheuni @BrandesLab @InstCardReg_FFM @CPI_ExStra and @trr267 ! Come and talk to us about all things #RNA, #epigenetics and gene regulation 🧬

Marcel Schulz - @marcelschulz@genomic.social @TheMarcelSchulz Jul 24, 2023

Reunion of old and new students at #ISMBECCB2023 looking forward to exciting discussions over the next days @tim_warwick @nbaumgarten_ @fatemeh383 @ranjankrmaji @fschmidt92 @sivarajank @shamimashrafiy

View quoted post on X